"T_coffee_NJ"
type: WorkflowTemplateProcess
label: nestedWorkflow
type: C73380
type: D003069
type: NCBITaxon_13443
type: NCBITaxon_13442
is step of template: 1097.xml

"Get_dnd"
type: WorkflowTemplateProcess
label: WSDL
type: poll
type: C88201
type: C80736
type: OBI_0001173
type: C47920
type: C20461
type: C25626
type: D004282
uses: data3
is step of template: 1097.xml

"EBI_MUSCLE_poll_job"
type: WorkflowTemplateProcess
label: nestedWorkflow
type: D009132
type: C12435
type: SO_0000905
type: C25688
type: C86058
type: C82964
type: C23369
type: C25193
type: C88201
type: C22691
type: C13056
type: nlx res 20090109
type: EFO_0001949
type: C23958
type: SWO_0000060
is step of template: 1097.xml

"EBI_TCoffee_poll_job"
type: WorkflowTemplateProcess
label: nestedWorkflow
type: SO_0000905
type: SWO_0000064
type: C25688
type: C86058
type: C82964
type: C25193
type: C88201
type: OBIws_0000133
type: nlx res 20090109
type: data 1675
is step of template: 1097.xml

"Get_alignment_result"
type: WorkflowTemplateProcess
label: WSDL
type: poll
type: BAO_0000179
type: C76125
type: operation_0292
type: C89252
type: C15785
type: C78728
type: SIO_010066
type: topic_0083
type: C49033
type: C25673
type: C13299
type: BAO_0002231
type: C82964
type: PATO_0001652
type: data_0863
type: SWO_7000003
type: C25193
type: C88201
type: C43465
type: BAO_0002245
type: operation 2928
type: D016415
type: C17648
type: data 2100
type: PATO_0002118
type: data 2044
type: C20461
type: SWO_7000002
type: C20200
type: operation_0492
type: OBIws_0000117
type: nlx res 20090109
type: SIO_010067
type: data 1916
type: SIO_001118
type: SO_0000001
type: C45374
type: topic_0182
type: C25284
uses: data7
is step of template: 1097.xml

"EBI_ClustalW2_poll_job"
type: WorkflowTemplateProcess
label: nestedWorkflow
type: SO_0000905
type: C25688
type: C86058
type: C82964
type: C25193
type: C88201
type: OBIws_0000133
type: nlx res 20090109
type: data 1675
type: C69307
type: C64943
is step of template: 1097.xml

"fproml"
type: WorkflowTemplateProcess
label: SOAP
type: phylogeny molecular sequence.fproml
type: data_0872
type: GO_0003675
type: C25564
type: SIO_010043
type: sao26622963
type: C41172
type: topic_0084
type: C17021
type: CHEBI_36080
type: PR_000000001
type: birnlex 23
type: BAO_0000175
type: SIO_001243
type: C82868
type: C64858
type: MS_1000882
type: C54154
type: D010802
type: format 1208
uses: data8
is step of template: 1097.xml

"fetchBatch"
type: WorkflowTemplateProcess
label: WSDL
type: fetchBatch
type: SIO_000289
type: C15785
type: C15426
type: D007060
type: data_0581
type: C24801
type: nlx res 20090405
type: D019991
type: C20461
type: ERO_0001716
type: C29939
type: D012718
type: C71598
type: C42761
type: C75604
type: SIO_000750
type: C47894
type: format 1915
is step of template: 1097.xml

"fdrawtree"
type: WorkflowTemplateProcess
label: SOAP
type: phylogeny tree drawing.fdrawtree
type: D014197
type: SIO_000945
type: C43559
type: IAO_0000309
type: C45418
is step of template: 1097.xml

"ClustalW2_NJ"
type: WorkflowTemplateProcess
label: nestedWorkflow
is step of template: 1097.xml

"fconsense"
type: WorkflowTemplateProcess
label: SOAP
type: phylogeny consensus.fconsense
type: D014197
type: SIO_001198
type: C42861
type: SO_0000993
type: OBIws_0000181
type: IAO_0000055
type: format 1209
type: CAO_00497
type: C64197
type: D032921
type: C78269
type: C45418
uses: data5
uses: data4
is step of template: 1097.xml

"Get_nj_tree_result"
type: WorkflowTemplateProcess
label: WSDL
type: poll
type: BAO_0000179
type: D014197
type: C76125
type: operation_0292
type: C89252
type: C15785
type: C78728
type: SIO_010066
type: topic_0083
type: C49033
type: C25673
type: C13299
type: BAO_0002231
type: PATO_0001652
type: C82964
type: data_0863
type: SWO_7000003
type: C25193
type: C88201
type: C43465
type: operation 2928
type: BAO_0002245
type: D016415
type: C17648
type: data 2100
type: PATO_0002118
type: data 2044
type: C20461
type: SWO_7000002
type: C20200
type: operation_0492
type: OBIws_0000117
type: nlx res 20090109
type: SIO_010067
type: data 1916
type: SIO_001118
type: SO_0000001
type: C45374
type: topic_0182
type: C25284
type: C45418
is step of template: 1097.xml

"emma"
type: WorkflowTemplateProcess
label: SOAP
type: alignment multiple.emma
type: C85492
type: C82535
type: operation_0292
type: GO_0003675
type: C89252
type: C71460
type: OBI_0000272
type: SIO_010008
type: C78728
type: SIO_010043
type: sao26622963
type: SIO_010066
type: topic_0083
type: C49033
type: C41172
type: C25673
type: SIO_010453
type: C13299
type: BAO_0002231
type: PATO_0001652
type: C40570
type: C48057
type: GO_0005561
type: data_0863
type: SWO_7000003
type: C13197
type: C17021
type: CHEBI_36080
type: PR_000000001
type: C43465
type: birnlex 23
type: operation 2928
type: BAO_0002245
type: D016415
type: C16847
type: EFO_0004416
type: C17648
type: PATO_0002118
type: CHEBI 6605
type: data 2044
type: C706
type: SWO_7000002
type: C64858
type: SWO_0000053
type: operation_0492
type: OBIws_0000117
type: SIO_010067
type: data 1916
type: SIO_001118
type: SO_0000001
type: sao83745184
type: C45374
type: C75354
type: topic_0182
uses: data6
is step of template: 1097.xml

"emma_ML"
type: WorkflowTemplateProcess
label: nestedWorkflow
is step of template: 1097.xml

"runMuscle"
type: WorkflowTemplateProcess
label: WSDL
type: runMuscle
type: C25695
type: D009132
type: operation_0292
type: C89252
type: C12435
type: Q000032
type: C15785
type: C78728
type: SIO_010066
type: topic_0083
type: C49033
type: C25673
type: C95494
type: C13299
type: BAO_0002231
type: PATO_0001652
type: C82964
type: operation 2945
type: data_0007
type: data_0863
type: C23369
type: SWO_7000003
type: C25193
type: C22691
type: C43465
type: C13056
type: operation 2928
type: BAO_0002245
type: D016415
type: C44476
type: C17648
type: PATO_0002118
type: C25391
type: data 2044
type: C20461
type: SWO_7000002
type: operation_0492
type: OBIws_0000117
type: nlx res 20090109
type: SIO_010067
type: EFO_0001949
type: data 1916
type: SIO_001118
type: SO_0000001
type: C45374
type: topic_0182
type: C23958
type: C84337
type: SWO_0000060
uses: data6
is step of template: 1097.xml

"Nested_Workflow1"
type: WorkflowTemplateProcess
label: nestedWorkflow
type: C89252
type: C47884
type: SWO_0000142
type: data 1056
type: C15426
type: format 1929
type: MS_1001348
type: data_0581
type: C25673
type: SIO_000150
type: C13299
type: C47845
type: nlx res 20090405
type: C43465
type: topic_0080
type: C43432
type: D019991
type: C80736
type: OBI_0001173
type: C47920
type: data 2044
type: C20461
type: C95827
type: ERO_0001716
type: MS_1001013
type: SIO_001118
type: C42761
type: SO_0000001
type: C43381
type: C45374
type: SIO_000750
type: format 1915
is step of template: 1097.xml

"Muscle_ML"
type: WorkflowTemplateProcess
label: nestedWorkflow
type: D009132
type: C12435
type: C23369
type: C22691
type: C13056
type: EFO_0001949
type: C23958
type: SWO_0000060
is step of template: 1097.xml

"ClustalW2_phylogenetic_tree"
type: WorkflowTemplateProcess
label: nestedWorkflow
type: data_0872
type: D014197
type: topic_0083
type: C49033
type: PATO_0001652
type: operation 2928
type: OBIws_0000178
type: data 1916
type: C42620
type: C45418
is step of template: 1097.xml

"Get_output"
type: WorkflowTemplateProcess
label: WSDL
type: poll
type: operation_0292
type: C89252
type: C15785
type: C78728
type: SIO_010066
type: topic_0083
type: C49033
type: C25673
type: C13299
type: BAO_0002231
type: PATO_0001652
type: C82964
type: data_0863
type: SWO_7000003
type: C25193
type: C88201
type: C43465
type: operation 2928
type: BAO_0002245
type: D016415
type: C17648
type: data 2100
type: PATO_0002118
type: C47906
type: data 2044
type: C20461
type: SWO_7000002
type: operation_0492
type: OBIws_0000117
type: nlx res 20090109
type: SIO_010067
type: data 1916
type: SIO_001118
type: SO_0000001
type: C45374
type: topic_0182
type: C25284
is step of template: 1097.xml

"fseqboot"
type: WorkflowTemplateProcess
label: SOAP
type: phylogeny molecular sequence.fseqboot
type: C13299
type: SIO_000094
type: C16275
type: topic_0080
type: D000465
type: birnlex_11009
type: birnlex 2084
type: IAO_0000064
uses: data9
uses: data10
uses: data11
is step of template: 1097.xml

"runTCoffee"
type: WorkflowTemplateProcess
label: WSDL
type: runTCoffee
type: C25695
type: Q000032
type: C15785
type: SWO_0000064
type: C73380
type: C95494
type: C82964
type: operation 2945
type: C25193
type: D003069
type: NCBITaxon_13443
type: C44476
type: C80736
type: OBI_0001173
type: C47920
type: C25391
type: NCBITaxon_13442
type: C20461
type: nlx res 20090109
type: C25626
type: D004282
is step of template: 1097.xml

"ClustalW2_alignment"
type: WorkflowTemplateProcess
label: nestedWorkflow
type: topic_0083
type: C49033
type: C13299
type: PATO_0001652
type: operation 2928
type: topic_0080
type: data 1916
is step of template: 1097.xml

"fprotdist"
type: WorkflowTemplateProcess
label: SOAP
type: phylogeny molecular sequence.fprotdist
type: GO_0003675
type: SIO_010043
type: sao26622963
type: C41172
type: SIO_000094
type: C17021
type: CHEBI_36080
type: PR_000000001
type: C16275
type: birnlex 23
type: D000465
type: birnlex_11009
type: birnlex 2084
type: BAO_0000175
type: C64858
type: MS_1000882
type: IAO_0000064
type: PATO_0000040
type: C25167
type: format 1208
is step of template: 1097.xml

"checkStatus"
type: WorkflowTemplateProcess
label: WSDL
type: checkStatus
type: D009132
type: operation_0292
type: C89252
type: C12435
type: C15785
type: SO_0000905
type: C78728
type: SIO_010066
type: topic_0083
type: C25688
type: C49033
type: C25673
type: C13299
type: BAO_0002231
type: PATO_0001652
type: C82964
type: data_0007
type: data_0863
type: C23369
type: SWO_7000003
type: C25193
type: C22691
type: C43465
type: C13056
type: operation 2928
type: BAO_0002245
type: D016415
type: C17648
type: PATO_0002118
type: data 2044
type: C20461
type: SWO_7000002
type: operation_0492
type: OBIws_0000117
type: nlx res 20090109
type: SIO_010067
type: EFO_0001949
type: data 1916
type: SIO_001118
type: SO_0000001
type: C45374
type: topic_0182
type: C23958
type: C84337
type: SWO_0000060
uses: data1
is step of template: 1097.xml

"checkStatus"
type: WorkflowTemplateProcess
label: WSDL
type: checkStatus
type: C15785
type: SO_0000905
type: SWO_0000064
type: C25688
type: C82964
type: C25193
type: C80736
type: OBI_0001173
type: C47920
type: C20461
type: nlx res 20090109
type: C25626
type: D004282
uses: data3
is step of template: 1097.xml

"checkStatus"
type: WorkflowTemplateProcess
label: WSDL
type: checkStatus
type: operation_0292
type: C89252
type: C15785
type: SO_0000905
type: C78728
type: SIO_010066
type: topic_0083
type: C25688
type: C49033
type: C25673
type: C13299
type: BAO_0002231
type: PATO_0001652
type: C82964
type: data_0863
type: SWO_7000003
type: C25193
type: C43465
type: operation 2928
type: BAO_0002245
type: D016415
type: C17648
type: PATO_0002118
type: data 2044
type: C20461
type: SWO_7000002
type: operation_0492
type: OBIws_0000117
type: nlx res 20090109
type: SIO_010067
type: data 1916
type: SIO_001118
type: SO_0000001
type: C45374
type: topic_0182
uses: data7
is step of template: 1097.xml

"ClustalW2"
type: WorkflowTemplateProcess
label: nestedWorkflow
type: D014197
type: data_0872
type: SIO_000289
type: operation_0292
type: C89252
type: SWO_0000051
type: C15785
type: C78728
type: SIO_010066
type: topic_0083
type: C49033
type: C24801
type: C25673
type: C13299
type: BAO_0002231
type: PATO_0001652
type: C38000
type: C64974
type: data_0863
type: SWO_7000003
type: C52647
type: C43465
type: operation 2928
type: BAO_0002245
type: C19711
type: D016415
type: topic_0080
type: C19223
type: OBIws_0000178
type: C80736
type: C17648
type: OBI_0001173
type: C47920
type: PATO_0002118
type: data 2044
type: C20461
type: SWO_7000002
type: C29939
type: SWO_0000053
type: operation_0492
type: OBIws_0000117
type: birnlex_11012
type: SIO_010067
type: data 1916
type: D012718
type: Program
type: SIO_001118
type: SO_0000001
type: C45374
type: topic_0182
type: C45418
type: C47894
is step of template: 1097.xml

"Muscle"
type: WorkflowTemplateProcess
label: nestedWorkflow
type: D009132
type: operation_0292
type: C89252
type: C12435
type: C15785
type: C78728
type: SIO_010066
type: topic_0083
type: C9612
type: C49033
type: C25673
type: C13299
type: BAO_0002231
type: PATO_0001652
type: C38000
type: data_0007
type: data_0863
type: C23369
type: SWO_7000003
type: C9998
type: C22691
type: C43465
type: C13056
type: operation 2928
type: BAO_0002245
type: D016415
type: SIO_000140
type: C80736
type: C16458
type: C17648
type: OBI_0001173
type: C47920
type: PATO_0002118
type: data 2044
type: C20461
type: SWO_7000002
type: C45412
type: operation_0492
type: OBIws_0000117
type: birnlex 2234
type: SWO_9000051
type: SIO_010067
type: EFO_0001949
type: data 1916
type: SIO_001118
type: SO_0000001
type: C45374
type: OBIws_0000048
type: topic_0182
type: C23958
type: C84337
type: SWO_0000060
is step of template: 1097.xml

"Get_aln"
type: WorkflowTemplateProcess
label: WSDL
type: poll
type: C88201
type: C80736
type: OBI_0001173
type: C47920
type: C20461
type: C12904
type: C25626
type: D004282
uses: data3
is step of template: 1097.xml

"T_coffee"
type: WorkflowTemplateProcess
label: nestedWorkflow
type: operation_0292
type: C89252
type: C15785
type: C78728
type: SIO_010066
type: SWO_0000064
type: topic_0083
type: C73380
type: C49033
type: C25673
type: C13299
type: BAO_0002231
type: PATO_0001652
type: C38000
type: data_0863
type: SWO_7000003
type: C43465
type: operation 2928
type: BAO_0002245
type: C19711
type: D016415
type: C19223
type: D003069
type: NCBITaxon_13443
type: SIO_000140
type: C80736
type: C17648
type: OBI_0001173
type: C47920
type: PATO_0002118
type: NCBITaxon_13442
type: data 2044
type: C20461
type: SWO_7000002
type: C45412
type: operation_0492
type: OBIws_0000117
type: birnlex 2234
type: SWO_9000051
type: SIO_010067
type: data 1916
type: SIO_001118
type: SO_0000001
type: C45374
type: OBIws_0000048
type: topic_0182
is step of template: 1097.xml

"Get_alignment"
type: WorkflowTemplateProcess
label: WSDL
type: poll
type: C15785
type: SWO_0000064
type: topic_0083
type: C49033
type: C82964
type: PATO_0001652
type: C25193
type: C88201
type: operation 2928
type: C80736
type: OBI_0001173
type: data 2100
type: C47920
type: C20461
type: nlx res 20090109
type: data 1916
type: C25284
type: C25626
type: D004282
uses: data3
is step of template: 1097.xml

"Get_alignment"
type: WorkflowTemplateProcess
label: WSDL
type: poll
type: D009132
type: operation_0292
type: C89252
type: C12435
type: C15785
type: C78728
type: SIO_010066
type: topic_0083
type: C49033
type: C25673
type: C13299
type: BAO_0002231
type: C82964
type: PATO_0001652
type: data_0007
type: data_0863
type: C23369
type: SWO_7000003
type: C25193
type: C88201
type: C22691
type: C43465
type: C13056
type: BAO_0002245
type: operation 2928
type: D016415
type: C17648
type: data 2100
type: PATO_0002118
type: data 2044
type: C20461
type: SWO_7000002
type: operation_0492
type: OBIws_0000117
type: nlx res 20090109
type: SIO_010067
type: EFO_0001949
type: data 1916
type: SIO_001118
type: SO_0000001
type: C45374
type: topic_0182
type: C23958
type: C25284
type: C84337
type: SWO_0000060
uses: data1
is step of template: 1097.xml

"Fetch"
type: WorkflowTemplateProcess
label: nestedWorkflow
type: birnlex 160
type: D051381
type: PATO_0001035
type: C89252
type: C15785
type: C47905
type: SWO_0000142
type: C15426
type: format 1929
type: C14266
type: data_0581
type: MS_1001348
type: data 1063
type: C43579
type: C25673
type: C71900
type: C13299
type: C64974
type: SIO_000487
type: nlx res 20090405
type: C47845
type: C43465
type: OBIws_0000097
type: SIO_000115
type: C48161
type: C25364
type: D019991
type: SIO_000140
type: C80736
type: OBI_0001173
type: C47920
type: data 2044
type: C20461
type: C45412
type: ERO_0001716
type: birnlex 2234
type: SWO_9000051
type: C53465
type: NCBITaxon_10114
type: SIO_001118
type: C42761
type: SO_0000001
type: C81275
type: C43381
type: C45374
type: OBIws_0000048
type: C23030
type: SIO_000750
type: data_0842
type: NCBITaxon_10116
type: format 1915
is step of template: 1097.xml

"T_coffe_ML"
type: WorkflowTemplateProcess
label: nestedWorkflow
is step of template: 1097.xml

"Get_guide_tree_result"
type: WorkflowTemplateProcess
label: WSDL
type: poll
type: C49974
type: BAO_0000179
type: D014197
type: C76125
type: operation_0292
type: C89252
type: C15785
type: C78728
type: SIO_010066
type: topic_0083
type: C49033
type: C25673
type: C13299
type: BAO_0002231
type: PATO_0001652
type: C82964
type: data_0863
type: SWO_7000003
type: C25193
type: C88201
type: C43465
type: operation 2928
type: BAO_0002245
type: D016415
type: C17648
type: data 2100
type: PATO_0002118
type: data 2044
type: C20461
type: SWO_7000002
type: C20200
type: operation_0492
type: OBIws_0000117
type: nlx res 20090109
type: SIO_010067
type: data 1916
type: SIO_001118
type: SO_0000001
type: C45374
type: topic_0182
type: C25284
type: C45418
uses: data7
is step of template: 1097.xml

"emma_NJ"
type: WorkflowTemplateProcess
label: nestedWorkflow
is step of template: 1097.xml

"fneighbor"
type: WorkflowTemplateProcess
label: SOAP
type: phylogeny distance matrix.fneighbor
type: C85492
type: C82535
type: C71460
type: OBI_0000272
type: C45802
type: C40570
type: C16847
type: C45805
type: data 2082
type: nlx inv 20090226
type: nlx anat 20090503
type: D010802
type: PATO_0000040
type: OBIws_0000100
type: data 2855
type: C25167
uses: data2
is step of template: 1097.xml

"runClustalW2"
type: WorkflowTemplateProcess
label: WSDL
type: runClustalW2
type: C25695
type: operation_0292
type: C89252
type: Q000032
type: C15785
type: C78728
type: SIO_010066
type: topic_0083
type: C49033
type: C25673
type: C95494
type: C13299
type: BAO_0002231
type: PATO_0001652
type: C82964
type: operation 2945
type: data_0863
type: SWO_7000003
type: C25193
type: C43465
type: operation 2928
type: BAO_0002245
type: D016415
type: C44476
type: C17648
type: PATO_0002118
type: C25391
type: data 2044
type: C20461
type: SWO_7000002
type: operation_0492
type: OBIws_0000117
type: SWO_0000053
type: nlx res 20090109
type: SIO_010067
type: data 1916
type: SIO_001118
type: SO_0000001
type: C45374
type: topic_0182
uses: data6
is step of template: 1097.xml

"Get_phylip_tree_result"
type: WorkflowTemplateProcess
label: WSDL
type: poll
type: BAO_0000179
type: D014197
type: C76125
type: operation_0292
type: C89252
type: C15785
type: C78728
type: SIO_010066
type: topic_0083
type: C49033
type: C25673
type: C13299
type: BAO_0002231
type: PATO_0001652
type: C82964
type: data_0863
type: SWO_7000003
type: C25193
type: C88201
type: C43465
type: operation 2928
type: BAO_0002245
type: D016415
type: C17648
type: data 2100
type: PATO_0002118
type: data 2044
type: C20461
type: SWO_7000002
type: C20200
type: operation_0492
type: OBIws_0000117
type: nlx res 20090109
type: SIO_010067
type: data 1916
type: SIO_001118
type: SO_0000001
type: C45374
type: topic_0182
type: C25284
type: C45418
is step of template: 1097.xml

"Get_output_result"
type: WorkflowTemplateProcess
label: WSDL
type: poll
type: BAO_0000179
type: C76125
type: operation_0292
type: C89252
type: C15785
type: C78728
type: SIO_010066
type: topic_0083
type: C49033
type: C25673
type: C13299
type: BAO_0002231
type: PATO_0001652
type: C82964
type: data_0863
type: SWO_7000003
type: C25193
type: C88201
type: C43465
type: operation 2928
type: BAO_0002245
type: D016415
type: C17648
type: data 2100
type: PATO_0002118
type: C47906
type: data 2044
type: C20461
type: SWO_7000002
type: C20200
type: operation_0492
type: OBIws_0000117
type: nlx res 20090109
type: SIO_010067
type: data 1916
type: SIO_001118
type: SO_0000001
type: C45374
type: topic_0182
type: C25284
uses: data7
is step of template: 1097.xml

"Muscle_NJ"
type: WorkflowTemplateProcess
label: nestedWorkflow
type: D009132
type: C12435
type: C23369
type: C22691
type: C13056
type: EFO_0001949
type: C23958
type: SWO_0000060
is step of template: 1097.xml

"fdrawgram"
type: WorkflowTemplateProcess
label: SOAP
type: phylogeny tree drawing.fdrawgram
type: D014197
type: SIO_000945
type: C77969
type: C43559
type: IAO_0000309
type: C45418
is step of template: 1097.xml

"ClustalW2_ML"
type: WorkflowTemplateProcess
label: nestedWorkflow
is step of template: 1097.xml